{"id":4036,"date":"2018-10-04T17:39:52","date_gmt":"2018-10-04T17:39:52","guid":{"rendered":"http:\/\/ibol.org\/site\/?page_id=4036"},"modified":"2019-04-23T11:50:15","modified_gmt":"2019-04-23T15:50:15","slug":"sequencing-facility","status":"publish","type":"page","link":"https:\/\/ibol.org\/site\/resources\/sequencing-facility\/","title":{"rendered":"Sequencing Facility"},"content":{"rendered":"<p>[et_pb_section fb_built=&#8221;1&#8243; fullwidth=&#8221;on&#8221; _builder_version=&#8221;3.22.3&#8243; top_divider_height=&#8221;104px&#8221; bottom_divider_color=&#8221;#ffffff&#8221; bottom_divider_height=&#8221;23px&#8221; bottom_divider_flip=&#8221;horizontal&#8221;][et_pb_fullwidth_header title=&#8221;Sequencing facility&#8221; _builder_version=&#8221;3.19.4&#8243; title_font=&#8221;Oswald||||||||&#8221; title_font_size=&#8221;40px&#8221; title_font_size_phone=&#8221;30px&#8221; title_font_size_last_edited=&#8221;on|desktop&#8221; subhead_font=&#8221;|||on|||||&#8221; subhead_font_size=&#8221;25px&#8221; use_background_color_gradient=&#8221;on&#8221; background_color_gradient_start=&#8221;#003254&#8243; background_color_gradient_end=&#8221;#646564&#8243; background_color_gradient_direction=&#8221;90deg&#8221; background_color_gradient_start_position=&#8221;8%&#8221; background_color_gradient_end_position=&#8221;77%&#8221; text_shadow_style=&#8221;preset3&#8243; button_one_text_size__hover_enabled=&#8221;off&#8221; button_two_text_size__hover_enabled=&#8221;off&#8221; button_one_text_color__hover_enabled=&#8221;off&#8221; button_two_text_color__hover_enabled=&#8221;off&#8221; button_one_border_width__hover_enabled=&#8221;off&#8221; button_two_border_width__hover_enabled=&#8221;off&#8221; button_one_border_color__hover_enabled=&#8221;off&#8221; button_two_border_color__hover_enabled=&#8221;off&#8221; button_one_border_radius__hover_enabled=&#8221;off&#8221; button_two_border_radius__hover_enabled=&#8221;off&#8221; button_one_letter_spacing__hover_enabled=&#8221;off&#8221; button_two_letter_spacing__hover_enabled=&#8221;off&#8221; button_one_bg_color__hover_enabled=&#8221;off&#8221; button_two_bg_color__hover_enabled=&#8221;off&#8221;][\/et_pb_fullwidth_header][\/et_pb_section][et_pb_section fb_built=&#8221;1&#8243; admin_label=&#8221;Biological Collections&#8221; _builder_version=&#8221;3.22.3&#8243; background_color=&#8221;#ffffff&#8221; background_size=&#8221;contain&#8221; background_position=&#8221;top_center&#8221; custom_padding=&#8221;54px|0px|54px|0px|false|false&#8221; top_divider_flip=&#8221;horizontal&#8221;][et_pb_row custom_padding=&#8221;44px|0px|43px|0px|false|false&#8221; admin_label=&#8221;row&#8221; module_id=&#8221;ibol1-collections&#8221; _builder_version=&#8221;3.22.3&#8243; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221; custom_css_main_element=&#8221;padding-bottom: 0px;||padding-top: 10px;&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;3.0.47&#8243;][et_pb_text _builder_version=&#8221;3.22.4&#8243; text_font=&#8221;||||||||&#8221; text_font_size_phone=&#8221;16px&#8221; text_font_size_last_edited=&#8221;on|desktop&#8221; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221;]<\/p>\n<p style=\"text-align: center;\">The Canadian Centre for DNA Barcoding (CCDB) is the\u00a0primary analytical\u00a0hub for the iBOL Consortium. It has generated over 75% of all available DNA barcode records and will continue its analytical work in support of BIOSCAN.<\/p>\n<p>[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=&#8221;1&#8243; admin_label=&#8221;CCDB Image&#8221; _builder_version=&#8221;3.22.3&#8243; background_image=&#8221;https:\/\/ibol.org\/site\/wp-content\/uploads\/2018\/11\/CCDB.jpg&#8221;][et_pb_row module_class=&#8221; et_pb_row_fullwidth&#8221; _builder_version=&#8221;3.22.3&#8243; width=&#8221;89%&#8221; width_tablet=&#8221;80%&#8221; width_last_edited=&#8221;on|desktop&#8221; max_width=&#8221;89%&#8221; max_width_tablet=&#8221;80%&#8221; max_width_last_edited=&#8221;on|desktop&#8221; custom_css_main_element=&#8221;padding-bottom: 0px;&#8221; make_fullwidth=&#8221;on&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;3.0.47&#8243;][et_pb_divider show_divider=&#8221;off&#8221; _builder_version=&#8221;3.15&#8243; height=&#8221;70px&#8221;]&nbsp;<br \/>\n[\/et_pb_divider][et_pb_text _builder_version=&#8221;3.19.4&#8243; text_font=&#8221;||||||||&#8221; header_3_font=&#8221;||||||||&#8221; header_3_font_size_phone=&#8221;20px&#8221; header_3_font_size_last_edited=&#8221;on|desktop&#8221; header_3_line_height=&#8221;1.4em&#8221; header_4_font=&#8221;||||||||&#8221; header_4_text_color=&#8221;#003254&#8243; header_4_line_height=&#8221;1.5em&#8221; background_color=&#8221;rgba(255,255,255,0.84)&#8221; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221; custom_padding=&#8221;20px||20px|&#8221;]<\/p>\n<h3 style=\"text-align: center;\">Sanger, second, and third generation sequencing platforms<\/h3>\n<h3 style=\"text-align: center;\"><span style=\"color: #ff6600;\">$7,000,000 in sequencing\u00a0 and robotic liquid handling instrumentation<\/span><\/h3>\n<h3 style=\"text-align: center;\">Processing capacity of more than a million specimens per year<\/h3>\n<h3 style=\"text-align: center;\"><span style=\"color: #ff6600;\">15+ years of experience in the field<\/span><\/h3>\n<p>[\/et_pb_text][et_pb_divider show_divider=&#8221;off&#8221; _builder_version=&#8221;3.15&#8243; height=&#8221;100px&#8221;]&nbsp;<br \/>\n[\/et_pb_divider][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=&#8221;1&#8243; _builder_version=&#8221;3.22.3&#8243;][et_pb_row custom_padding=&#8221;0|0px|67px|0px|false|false&#8221; admin_label=&#8221;row&#8221; module_id=&#8221;ibol1-collections&#8221; _builder_version=&#8221;3.22.3&#8243; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221; custom_css_main_element=&#8221;padding-top: 0px;&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;3.0.47&#8243;][et_pb_text _builder_version=&#8221;3.19.4&#8243; text_font=&#8221;||||||||&#8221; text_font_size_phone=&#8221;16px&#8221; text_font_size_last_edited=&#8221;on|desktop&#8221; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221;]<\/p>\n<div class=\"page\" title=\"Page 7\">\n<div class=\"layoutArea\">\n<div class=\"column\">\n<p style=\"text-align: center;\">The CCDB is constantly innovating to maximize workflow efficiency and\u00a0to provide a high-throughput sequencing\u00a0service. This extends to its sequencing methodologies, advanced robotics, protocol development,\u00a0and physical lab design.<\/p>\n<\/div>\n<\/div>\n<\/div>\n<p>[\/et_pb_text][et_pb_button button_url=&#8221;http:\/\/ccdb.ca\/&#8221; url_new_window=&#8221;on&#8221; button_text=&#8221;Learn more&#8221; button_alignment=&#8221;center&#8221; _builder_version=&#8221;3.17.2&#8243; custom_button=&#8221;on&#8221; button_text_color=&#8221;#003254&#8243; button_border_color=&#8221;#003254&#8243; button_font=&#8221;||||||||&#8221; button_icon=&#8221;%%32%%&#8221; button_icon_color=&#8221;#003254&#8243; button_on_hover=&#8221;off&#8221; button_text_color_hover=&#8221;#ffffff&#8221; button_bg_color_hover=&#8221;#003254&#8243; button_text_size__hover_enabled=&#8221;off&#8221; button_one_text_size__hover_enabled=&#8221;off&#8221; button_two_text_size__hover_enabled=&#8221;off&#8221; button_text_color__hover_enabled=&#8221;on&#8221; button_text_color__hover=&#8221;#ffffff&#8221; button_one_text_color__hover_enabled=&#8221;off&#8221; 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specialty=&#8221;on&#8221; padding_top_1=&#8221;40px&#8221; padding_top_2=&#8221;14px&#8221; _builder_version=&#8221;3.19.4&#8243; background_color=&#8221;#3c3d41&#8243; custom_margin=&#8221;0px||&#8221; custom_margin_last_edited=&#8221;on|desktop&#8221; custom_padding=&#8221;0|0px|0|0px|false|false&#8221; global_module=&#8221;3909&#8243; saved_tabs=&#8221;all&#8221;][et_pb_column type=&#8221;1_3&#8243; _builder_version=&#8221;3.0.47&#8243; padding_top__hover=&#8221;40px&#8221; parallax__hover=&#8221;off&#8221; parallax_method__hover=&#8221;on&#8221;][et_pb_image src=&#8221;https:\/\/ibol.org\/site\/wp-content\/uploads\/2018\/10\/iBOL-logo-vertical-small-copy.png&#8221; url=&#8221;https:\/\/ibol.org\/&#8221; align=&#8221;center&#8221; always_center_on_mobile=&#8221;off&#8221; admin_label=&#8221;iBOL logo&#8221; _builder_version=&#8221;3.19.7&#8243; max_width_tablet=&#8221;100%&#8221; max_width_phone=&#8221;30%&#8221; max_width_last_edited=&#8221;on|tablet&#8221; module_alignment=&#8221;center&#8221; 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saved_specialty_column_type=&#8221;2_3&#8243; _builder_version=&#8221;3.0.47&#8243; parallax__hover=&#8221;off&#8221; parallax_method__hover=&#8221;on&#8221;][et_pb_text admin_label=&#8221;Footer Links&#8221; _builder_version=&#8221;3.19.7&#8243; text_font=&#8221;Montserrat|500||on|||||&#8221; text_text_color=&#8221;#aaaaaa&#8221; text_font_size=&#8221;15px&#8221; text_font_size_phone=&#8221;10px&#8221; text_font_size_last_edited=&#8221;on|desktop&#8221; text_line_height=&#8221;2.2em&#8221; header_font=&#8221;Montserrat||||||||&#8221; text_orientation=&#8221;center&#8221; background_layout=&#8221;dark&#8221;]<\/p>\n<p><span style=\"margin-right: 3%;\"><a style=\"color: #aaaaaa;\" href=\"https:\/\/ibol.org\/\">HOME<\/a><\/span> <span style=\"margin-right: 3%;\"><a style=\"color: #aaaaaa;\" href=\"https:\/\/ibol.org\/about\/dna-barcoding\">DNA BARCODING<\/a><\/span><span style=\"margin-right: 3%;\"><a style=\"color: #aaaaaa;\" href=\"https:\/\/ibol.org\/projects\/bioscan\/\">BIOSCAN<\/a><\/span> <span style=\"margin-right: 3%;\"><a style=\"color: #aaaaaa;\" href=\"https:\/\/ibol.org\/get-involved\/\">JOIN<\/a><\/span> <span style=\"margin-right: 3%;\"><a style=\"color: #aaaaaa;\" href=\"https:\/\/ibol.org\/contact\/\">CONTACT<\/a><\/span><a style=\"color: #aaaaaa;\" href=\"https:\/\/ibol.org\/sitemap\/\">SITEMAP<\/a><\/p>\n<p>[\/et_pb_text][et_pb_divider color=&#8221;#666666&#8243; _builder_version=&#8221;3.17.2&#8243; custom_margin_phone=&#8221;||-26px&#8221; custom_margin_last_edited=&#8221;on|desktop&#8221; hide_on_mobile=&#8221;off&#8221;][\/et_pb_divider][et_pb_text admin_label=&#8221;Copyright&#8221; _builder_version=&#8221;3.19.7&#8243; text_font=&#8221;Source Sans Pro||||&#8221; text_text_color=&#8221;#aaaaaa&#8221; text_font_size=&#8221;16&#8243; text_font_size_phone=&#8221;13px&#8221; text_font_size_last_edited=&#8221;on|desktop&#8221; text_line_height=&#8221;1.5em&#8221; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221; text_orientation=&#8221;center&#8221; max_width=&#8221;560px&#8221; module_alignment=&#8221;center&#8221; custom_margin=&#8221;||30px|&#8221; custom_margin_tablet=&#8221;||10px|&#8221; custom_margin_last_edited=&#8221;on|tablet&#8221; custom_padding=&#8221;30px|||&#8221; custom_padding_phone=&#8221;14px||&#8221; custom_padding_last_edited=&#8221;on|desktop&#8221; use_border_color=&#8221;off&#8221; border_color=&#8221;#ffffff&#8221; border_style=&#8221;solid&#8221;]<\/p>\n<p>\u00a9 Copyright 2019 International Barcode of Life Consortium. All Rights Reserved.<\/p>\n<p>[\/et_pb_text][\/et_pb_column_inner][\/et_pb_row_inner][\/et_pb_column][\/et_pb_section]<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The Canadian Centre for DNA Barcoding (CCDB) is the\u00a0primary analytical\u00a0hub for the iBOL Consortium. It has generated over 75% of all available DNA barcode records and will continue its analytical work in support of BIOSCAN. &nbsp; Sanger, second, and third generation sequencing platforms $7,000,000 in sequencing\u00a0 and robotic liquid handling instrumentation Processing capacity of more [&hellip;]<\/p>\n","protected":false},"author":2,"featured_media":0,"parent":2466,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"[column width=\"eight\" place=\"first\"]<h3>Background<\/h3>\r\nBecause of their digital format, DNA barcode libraries allow the automation of specimen identification and species discovery. This automation is massively improving our ability to monitor, understand, and manage biodiversity with major scientific, forensic, epidemiological, and economic benefits. Because the development of a DNA barcode reference library for all species is both prohibitively expensive and logistically impossible for any nation, the benefits of creating an international partnership to assemble this resource were clear from the outset. In response, leaders of the biodiversity science community indicated their support in 2007 for an international research collaboration to achieve this goal. Three years later, the International Barcode of Life (iBOL) Project was formally activated.\r\n[\/column] \r\n\r\n[column width=\"eight\" place=\"last\"]<h3>iBOL Phase I (2010\u20132015)<\/h3>\r\nResearchers from 25 nations activated the International Barcode of Life (iBOL) Project in 2010 to advance the construction of a DNA barcode library for multicellular eukaryotes. This research alliance demonstrated its competence by delivering DNA barcodes for 500,000 species by 2015. It also developed the informatics tools and the analytical protocols needed for DNA barcoding to emerge as a vital component of the global biosciences infrastructure. To permit this progress, nations involved in iBOL raised >$100 million from grant councils, government agencies, philanthropists, and the private sector. Most of these funds were expended within their source nation to support contributions to the project, but overall progress benefited greatly from $50 million provided by Canadian agencies to establish a core facility that provided essential sequencing and informatics support to the iBOL community.\r\n[\/column]","_et_gb_content_width":"","footnotes":""},"class_list":["post-4036","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/pages\/4036","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/comments?post=4036"}],"version-history":[{"count":0,"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/pages\/4036\/revisions"}],"up":[{"embeddable":true,"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/pages\/2466"}],"wp:attachment":[{"href":"https:\/\/ibol.org\/site\/wp-json\/wp\/v2\/media?parent=4036"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}