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Research contributions by iBOL partners

The publications listed here have been generated as part of the iBOL project.

Click here for a more comprehensive bibliography of publications about DNA barcoding.

Authors who have received iBOL funding to cover their sequencing costs are requested to acknowledge that contribution as follows:
"We are grateful for support provided by the Government of Canada through Genome Canada and the Ontario Genomics Institute to the International Barcode of Life Project. This funding enabled the Canadian Centre for DNA Barcoding (University of Guelph) to carry out the sequence analysis on our specimens. We also thank the Ontario Ministry of Economic Development and Innovation for funding the ongoing development of BOLD."

B | C | D | E | F | G | H | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | Z


 

A

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Adamski D, Copeland RS, Miller SE, Darrow K, Hebert PDN, Luke Q (2010) A Review of African Blastobasinae (Lepidoptera: Gelechioidea: Coleophoridae), with New Taxa Reared from Native Fruits in Kenya. Smithsonian Contributions to Zoology 630: 1-63 | LINK

Albu M, Nikbakht H, Hajibabaei M, Hickey D (2011) The DNA Barcode Linker. Molecular Ecology Resources 11: 84-88 | LINK

Allcock AL, Barratt I, Eleaume M, Linse K, Norman MD, Smith PJ, Steinke D, Stevens DW, Strugnell J (2011) Cryptic speciation and the circumpolarity debate: a case study on endemic Southern Ocean octopuses using the COI barcode of life. Deep Sea Research Part II: Topical Studies in Oceanography 58: 242-249, | LINK

April J, Mayden RL, Hanner RH, Bernatchez L (2011) Genetic calibration of species diversity among North America's freshwater fishes. Proceedings of the National Academy of Sciences of the United States of America 108: 10602-10607, | LINK

Aquilino SVL, Tango JM, Fontanilla IKC, Pagulayan RC, Basiao ZU, Ong PS, Quilang JP (2011) DNA barcoding of the ichthyofauna of Taal Lake, Philippines. Molecular Ecology Resources 11: 612-619 | LINK

Aquino LM, Tango JM, Canoy RJ, Fontanilla IK, Basiao ZU, Ong PS, Quilang JP (2011) DNA barcoding of fishes of Laguna de Bay, Philippines. Mitochondrial DNA 22: 143-153 | LINK

Arango CP, Soler-Membrives A, Miller KJ (2011) Genetic differentiation in the circum--Antarctic sea spider Nymphon australe (Pycnogonida; Nymphonidae). Deep Sea Research Part II: Topical Studies in Oceanography 58: 212-219 | LINK

Archaux FL, A. (2011) Découverte de Thera vetustata ([Denis & Schiffermüller], 1775) dans le Loiret, espèce nouvelle pour la région Centre. Alexanor 24: 45-49, | LINK

Asgharian H, Sahafi HH, Ardalan AA, Shekarriz S, Elahi E (2011) Cytochrome c oxidase subunit 1 barcode data of fish of the Nayband National Park in the Persian Gulf and analysis using meta-data flag several cryptic species. Molecular Ecology Resources 11: 461-472 | LINK

Ashfaq M, Ara J, Noor AR, Hebert PDN, Mansoor S (2011) Molecular phylogenetic analysis of a scale-like insect infesting mango orchards in Pakistan. European Journal of Entomology | LINK

Astrin JJ, Stuben PE, Misof B, Wolfgang Wagele J, Gimnich F, Raupach MJ, Ahrens D (2011) Exploring diversity in cryptorhynchine weevils (Coleoptera) using distance-, character- and tree-based species delineation. Mol Phylogenet Evol | LINK

 


B

 

Baird DJ, Pascoe TJ, Zhou X, Hajibabaei M (2011) Building freshwater macroinvertebrate DNA-barcode libraries from reference collection material: formalin preservation vs specimen age. Journal of the North American Benthological Society 30: 125-130 | LINK

Baldwin C, Castillo C, Weigt L, Victor B (2011) Seven new species within western Atlantic Starksia atlantica, S. lepicoelia, and S. sluiteri (Teleostei, Labrisomidae), with comments on congruence of DNA barcodes and species. ZooKeys 79: 21-72 | LINK

Baldwin CC, Weigt LA (2012) A New Species of Soapfish (Teleostei: Serranidae: Rypticus), with Redescription of R. subbifrenatus and Comments on the Use of DNA Barcoding in Systematic Studies. Copeia 2012, No. 1, 23–36 | LINK

Becker S, Hanner R, Steinke D (2011) Five years FISH-BOL - brief status report. Mitochondrial DNA 22(S1): 3-9 | LINK

Burns JM, Janzen DH, Hallwachs W, Hajibabaei M, Hebert PDN (2009) Genitalia, DNA Barcodes, and life histories synonymize Telles with Thracides - a genus in which Telles arcalaus looks out of place (Hesperiidae: Hesperiinae). Journal of the Lepidopterists Society 63: 141-153 | LINK


C

Campagna L, Lijtmaer D, Kerr KCR, Barreira AS, Hebert PDN, LOUGHEED SC, Tubaro PL (2010) DNA barcodes provide new evidence of a recent radiation in the genus Sporophila (Aves: Passeriformes). Molecular Ecology Resources 10: 449-458 | LINK

Carr CM, Hardy SM, Brown TM, Macdonald TA, Hebert PDN (2011) A Tri-Oceanic Perspective: DNA Barcoding Reveals Geographic Structure and Cryptic Diversity in Canadian Polychaetes. PLoS ONE 6: e22232 | LINK

Clare EL, Lim BK, Fenton MB, Hebert PDN (2011) Neotropical Bats: Estimating Species Diversity with DNA Barcodes. PLoS ONE 6: e22648 | LINK

Clarkston BE, Saunders GW (2010) A comparison of two DNA barcode markers for species discrimination in the red algal family Kallymeniaceae (Gigartinales, Florideophyceae), with a description of Euthora timburtonii sp. nov. Botany 88: 119-131 | LINK

Collins RA, Armstrong KF, Meier R, Yi Y, Brown SDJ, Cruickshank RH, Keeling S, Johnston C (2012) Barcoding and Border Biosecurity: Identifying Cyprinid Fishes in the Aquarium Trade. PLoS ONE 7: e28381 | LINK

Costa FO, Landi1 M, Martins R, Costa MH, Costa ME, Carneiro M, Alves MJ, Steinke D, Carvalho GR (2012) A Ranking System for Reference Libraries of DNA Barcodes: Application to Marine Fish Species from Portugal. PLoS ONE 7(4): e35858. doi:10.1371/journal.pone.0035858 | LINK

Craft KJ, Pauls SU, Darrow K, Miller SE, Hebert PDN, Helgen LE, Novotny V, Weiblen GD (2010) Population genetics of ecological communities with DNA barcodes: An example from New Guinea Lepidoptera. Proceedings of the National Academy of Sciences of the United States of America 107: 5041-5046 | LINK


D

 

de Carvalho DC, Oliveira DAA, Pompeu PS, Gontijo Leal C, Oliveira C, Hanner R (2011) Deep barcode divergence in Brazilian freshwater fishes: the case of the São Francisco River basin. Mitochondrial DNA 22 (S1): 80-86 | LINK

deWaard JR, Hebert PD, Humble LM (2011) A comprehensive DNA barcode library for the looper moths (Lepidoptera: Geometridae) of British Columbia, Canada. PLoS ONE 6: e18290 | LINK

Dinca V, Cuvelier S, Zakharov EV, Hebert PDN, Vila R (2011) Biogeography, ecology and conservation of Erebia oeme (Hubner) in the Carpathians (Lepidoptera: Nymphalidae: Satyrinae). Annales De La Societe Entomologique De France 46: 486-498 | LINK

Dinca V, Zakharov EV, Hebert PDN, Vila R (2011) Complete DNA barcode reference library for a country's butterfly fauna reveals high performance for temperate Europe. Proceedings of the Royal Society B: Biological Sciences 278: 347-355 | LINK


E

 

Ekrem T, Stur E, Hebert PDN (2010) Females do count: Documenting Chironomidae (Diptera) species diversity using DNA barcoding. Organisms Diversity & Evolution 10: 397-408 | LINK

Escalante P, Desalle R, Kolokotronis S-O (2011) The MexBOL initiative. Mitochondrial DNA 21: 1-2 | LINK

Escalante P, Ibarra-Vazquez A, Rosas-Escobar P (2011) Tropical montane nymphalids in Mexico: DNA barcodes reveal greater diversity. Mitochondrial DNA 21: 30-37 | LINK


F

 

Fernandez-Triana J, Smith MA, Boudreault C, Goulet H, Hebert PD, Smith AC, Roughley R (2011) A Poorly Known High-Latitude Parasitoid Wasp Community: Unexpected Diversity and Dramatic Changes through Time. PLoS ONE 6: e23719 | LINK

Fernandez-Triana JL (2010) Eight new species and an annotated checklist of Microgastrinae (Hymenoptera, Braconidae) from Canada and Alaska. ZooKeys: 1-53 | LINK

Francis CM, Borisenko AV, Ivanova NV, Eger JL, Lim BK, Guillion-Servent A, Kruskop SV, Mackie I, Hebert PDN (2010) The Role of DNA Barcodes in Understanding and Conservation of Mammal Diversity in Southeast Asia. PLoS ONE 5: e12575 | LINK


G

 

Gariepy TD, Lindsay R, Ogden N, Gregory TR (2012) Identifying the last supper: utility of the DNA barcode library for bloodmeal identification in ticks. Mol Ecol Resour Apr 3. doi: 10.1111/j.1755-0998.2012.03140.x. [Epub ahead of print] | LINK

Geraci CJ, Al-Saffar MA, Zhou X (2011) DNA barcoding facilitates description of unknown faunas: a case study on Trichoptera in the headwaters of the Tigris River, Iraq. Journal of the North American Benthological Society 30: 163-173 | LINK

Gibbs J (2011) Revision of the metallic species of Lasioglossum (Dialictus) in Canada (Hymenoptera, Halictidae, Halictini). Zootaxa 3073: 4-382 | LINK

Gibbs J, Albert J, Packer L (2011) Dual origins of social parasitism in North American Dialictus (Hymenoptera: Halictidae) confirmed using a phylogenetic approach. Cladistics: no | LINK

 

Grant RA, Griffiths HJ, Steinke D, Wadley V, Linse K (2011) Antarctic DNA barcoding; a drop in the ocean? Polar Biology 34: 775-780 | LINK


H

 

Hajibabaei M, Shokralla S, Zhou X, Singer GAC, Baird DJ (2011) Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos. PLoS ONE 6: e17497 | LINK

Hanner R, Becker S, Ivanova NV, Steinke D (2011) FISH-BOL and seafood identification: Geographically dispersed case studies reveal systemic market substitution across Canada. Mitochondrial DNA 22 (S1): 106-122 | LINK

Hanner R, Floyd R, Bernard A, Collette BB, Shivji M (2011) DNA barcoding of billfishes. Mitochondrial DNA 22 (S1): 27-36 | LINK

Haslberger A, Huemer P, Segerer AH (2011) Ein unerwarteter Neufund für die deutsche Fauna: Agonopterix cluniana Huemer & Lvovsky, 2000 (Lepidoptera: Depressariidae). Entomologische Nachrichten und Berichte 55: 239-241 | LINK

Hausmann A (2011) An integrative taxonomic approach to resolving some difficult questions in the Larentiinae of the Mediterranean region (Lepidoptera, Geometridae). Mitteilungen der Münchner Entomologischen Gesellschaft 101: 73-97 | LINK

Hausmann A, Balke M, Hendrich L, Schmidt S, Segerer AH, Haszprunar G (2011) 5 Fakten zum DNA-Barcoding aus der 2-jährigen Praxis des fauna-Bavarica-Projektes (BFB). Nachrichtenblatt der bayerischen Entomologen 60: in press | LINK

Hausmann A, Haszprunar G, Hebert PDN (2011) DNA Barcoding the Geometrid Fauna of Bavaria (Lepidoptera): Successes, Surprises, and Questions. PLoS ONE 6: e17134 | LINK

Hausmann A, Haszprunar G, Segerer AH, Speidel W, Behounek G, Hebert PDN (2011) Now DNA-barcoded: the butterflies and larger moths of Germany. Spixiana 34 | LINK

Hausmann A, Hebert PDN (2009) Order Lepidoptera, family Geometridae (Part 2): The Geometridae of the UAE revised in the light of mtDNA data. In: van Harten T (ed) Arthropod fauna of the UAE 2. Dar Al Ummah Printing, Publishing, Distribution & Advertising,, Adu Dhabi, United Arab Emirate, pp 468-479

Hausmann A, Hebert PDN, Mitchell A, Rougerie R, Sommerer M, Edwards T, Young CJ (2009) Revision of the Australian Oenochroma vinaria Guenee, 1858 species-complex (Lepidoptera: Geometridae, Oenochrominae): DNA barcoding reveals cryptic diversity and assesses status of type specimen without dissection. Zootaxa: 1-21 | LINK

Hausmann A, Huemer P (2011) Taxonomic decision as a compromise: Acasis appensata (Eversmann, 1832 1842 ) in Central Italy - a case of conflicting evidence between DNA barcode and morphology (Lepidoptera: Geometridae). Zootaxa 3070 | LINK

Hausmann A, Parra LE (2009) An unexpected hotspot of moth biodiversity in Chilean northern Patagonia (Lepidoptera, Geometridae). Zootaxa: 23-38 | LINK

Hausmann A, Sommerer M, Rougerie R, Hebert P (2009) Hypobapta tachyhalotaria spec. nov from Tasmania - an example of a new species revealed by DNA barcoding. Spixiana 32: 161-166 | LINK

Hemery LG, Eléaume M, Roussel V, Améziane N, Gallut C, Steinke D, Cruaud C, Coulouz A, Wilson NG (2012) Comprehensive sampling reveals circumpolarity and sympatry in seven mitochondrial lineages of the Southern Ocean crinoid species Promachocrinus kerguelensis (Echinodermata). Molecular Ecology, 21: 2502–2518. doi: 10.1111/j.1365-294X.2012.05512.x | LINK

Hendrich L, Balke M, Haszprunar G, Hausmann A, Hebert PDN, Schmidt S (2010) Barcoding Fauna Bavarica – Capturing Central European Animal Diversity. In: Nimis PL, Vignes LR (eds) Tools for Identifying Biodiversity: Progress and Problems, pp 347 | LINK

Hernández-Roldán JL, Múrria C, Romo H, Talavera G, Zakharov E, Hebert PDN, Vila R (2011) Tracing the origin of disjunct distributions: a case of biogeographical convergence in Pyrgus butterflies. Journal of Biogeography 38: 2006-2020 | LINK

Hollingsworth PM, Graham SW, Little DP (2011) Choosing and using a plant DNA barcode. PLoS ONE 6: e19254 | LINK

Hubert N, Delrieu-Trottin E, Irisson J-O, Meyer C, Planes S (2010) Identifying coral reef fish larvae through DNA barcoding: a test case with the families Acanthuridae and Holocentridae. Molecular Phylogenetics and Evolution In Press, Accepted Manuscript | LINK

Huemer P (2011) Pseudo-endemism and cryptic diversity in Lepidoptera – case studies from the Alps and the Abruzzi. eco.mont 3: 11-18 | LINK

Huemer P, Hausmann A (2009) A new expanded revision of the European high mountain Sciadia tenebraria species group (Lepidoptera: Geometridae). Zootaxa 2117: 1-30 | LINK

Huemer P, Hebert PDN (2011) Cryptic diversity and phylogeography of high alpine Sattleria- a case study combining DNA barcodes and morphology (Lepidoptera: Gelechiidae). Zootaxa 2981 | LINK


J

 

Jackson MD, Marshall SA, Hanner R, Norrbom AL (2011) The fruit flies (Tephritidae) of Ontario. Canadian Journal of Arthropod Identification 15 | LINK

James SW, Porco D, Decaens T, Richard B, Rougerie R, Erseus C (2010) DNA Barcoding Reveals Cryptic Diversity in Lumbricus terrestris L., 1758 (Clitellata): Resurrection of L. herculeus (Savigny, 1826). PLoS ONE 5: e15629 | LINK

Janzen DH (2010) Hope for Tropical Biodiversity through True Bioliteracy. Biotropica 42: 540-542 | LINK

Janzen DH, Hallwachs W, Blandin P, Burns JM, Cadiou JM, Chacon I, Dapkey T, Deans AR, Epstein ME, Espinoza B, Franclemont JG, Haber WA, Hajibabaei M, Hall JPW, Hebert PDN, Gauld ID, Harvey DJ, Hausmann A, Kitching IJ, Lafontaine D, Landry J-F, Lemaire C, Miller JY, Miller JS, Miller L, Miller SE, Montero J, Munroe E, Green SR, Ratnasingham S, RAWLINS JE, Robbins RK, Rodriguez JJ, Rougerie R, Sharkey MJ, Smith MA, Solis MA, Sullivan JB, Thiaucourt P, Wahl DB, Weller SJ, Whitfield JB, WILLMOTT KR, Wood DM, Woodley NE, Wilson J (2009) Integration of DNA barcoding into an ongoing inventory of complex tropical biodiversity. Molecular Ecology Resources 9: 1-26 | LINK

Janzen DH, Hallwachs W, Burns JM, Hajibabaei M, Bertrand C, Hebert PDN (2011) Reading the Complex Skipper Butterfly Fauna of One Tropical Place. PLoS ONE 6: e19874 | LINK

Jeffery NW, Elias-Gutierrez M, Adamowicz SJ (2011) Species Diversity and Phylogeographical Affinities of the Branchiopoda (Crustacea) of Churchill, Manitoba, Canada. PLoS ONE 6: e18364 | LINK


K

 

Kerr K, Lijtmaer D, Barreira A, Hebert P, Tubaro P (2009) Probing evolutionary patterns in Neotropical birds through DNA barcodes. PLoS ONE 4: e4379 | LINK

Kerr KCR, Birks SM, Kalyakin MV, Red'kin YA, Koblik EA, Hebert PDN (2009) Filling the gap - COI barcode resolution in eastern Palearctic birds. Frontiers in Zoology 6 | LINK


L

 

Lakra WS, Verma MS, Goswamii M, Lal KK, Mohindra V, Punia P, Gopalakrishnan A, Singh KV, Ward RD, Hebert PDN (2011) DNA barcoding Indian marine fishes. Molecular Ecology Resources 11: 60-71 | LINK

Le Gall L, Saunders GW (2010) DNA Barcoding Is a Powerful Tool to Uncover Algal Diversity: A Case Study of the Phyllophoraceae (Gigartinales, Rhodophyta) in the Canadian Flora. Journal of Phycology 46: 374-389 | LINK

Lees DC, Rougerie R, Zeller-Lukashort C, Kristensen NP (2010) DNA mini-barcodes in taxonomic assignment: a morphologically unique new homoneurous moth clade from the Indian Himalayas described in Micropterix (Lepidoptera, Micropterigidae). Zoologica Scripta 39: 642-661 | LINK

Li YW, Zhou X, Feng G, Hu HY, Niu LM, Hebert PDN, Huang DW (2010) COI and ITS2 sequences delimit species, reveal cryptic taxa and host specificity of fig-associated Sycophila (Hymenoptera, Eurytomidae). Molecular Ecology Resources 10: 31-40 | LINK

Lijtmaer DA, Kerr KC, Barreira AS, Hebert PDN, Tubaro PL (2011) DNA barcode libraries provide insight into continental patterns of avian diversification. PLoS ONE 6: e20744 | LINK

Lijtmaer DA, Tubaro PL (2010) Barcoding South American Birds eLS. John Wiley & Sons, Ltd | LINK

Lörz AN, Linse K, Smith PJ, Steinke D (2012) First Molecular Evidence for Underestimated Biodiversity of Rhachotropis (Crustacea, Amphipoda), with Description of a New Species. PLoS ONE 7(3): e32365. doi:10.1371/journal.pone.0032365 | LINK

Lörz AN (2010) Deep-sea Rhachotropis (Crustacea: Amphipoda: Eusiridae) from New Zealand and the Ross Sea with key to the Pacific, Indian Ocean and Antarctic species. Zootaxa 2482: 22-48 | LINK

Lörz AN, Smith PJ, Linse K, Steinke D (2011) High genetic diversity within Epimeria georgiana (Amphipoda) from the southern Scotia Arc. Marine Biodiversity accepted | LINK

Lowenstein JH, Osmundson TW, Becker S, Hanner R, Stiassny MLJ (2011) Incorporating DNA barcodes into a multi-year inventory of the fishes of the hyperdiverse Lower Congo River, with a multi-gene performance assessment of the genus Labeo as a case study. Mitochondrial DNA 22 (S1): 52-70 | LINK

Lukhtanov V, Sourakov A, Zakharov E, Hebert P (2009) DNA barcoding Central Asian butterflies: increasing geographical dimension does not significantly reduce success of species identification. Mol Ecol Resources 9: 1302 - 1310 | LINK


M

 

Mabragana E, Diaz de Astarloa JM, Hanner R, Zhang J, Gonzalez Castro M (2011) DNA barcoding identifies argentine fishes from marine and brackish waters. PLoS ONE 6: e28655 | LINK

Mecklenburg CW, Møller PR, Steinke D (2011) Biodiversity of Arctic Marine Fishes: Taxonomy and Zoogeography. Marine Biodiversity 41: 109-140 | LINK

Moore ABM, White WT, Ward RD, Naylor GJP, Peirce R (2011) Rediscovery and redescription of the smoothtooth blacktip shark, Carcharhinus leiodon (Carcharhinidae), from Kuwait, with notes on its possible conservation status. Marine and Freshwater Research 62: 528-539 | LINK


N

 

Nazari V, Larson TB, Lees DC, Brattström O, Bouyer T, Van de Poel G, Hebert PDN (2011) Phylogenetic systematics of Colotis and associated genera (Lepidoptera: Pieridae): evolutionary and taxonomic implications. Journal of Zoological Systematics and Evolutionary Research 49: 204-215 | LINK

Newmaster SG, Ragupathy S, Janovec J (2009) A botanical renaissance: state-of-the-art DNA bar coding facilitates an Automated Identification Technology system for plants. International Journal of Computer Applications in Technology 35: 50-60 | LINK

Nwani CD, Becker S, Braid HE, Ude EF, Okogwo OI, Hanner R (2011) DNA barcoding discriminates freshwater fishes from southeastern Nigeria and provides river system-level phylogeographic resolution within some species. Mitochondrial DNA 22 (S1): 43-51 | LINK


O

 

Ogedengbe JD, Hanner RH, Barta JR (2011) DNA barcoding identifies Eimeria species and contributes to the phylogenetics of coccidian parasites (Eimeriorina, Apicomplexa, Alveolata). International Journal for Parasitology 41: 843-850 | LINK


P

 

Park DS, Suh SJ, Hebert PDN, Oh HW, Hong KJ (2011) DNA barcodes for two scale insect families, mealybugs (Hemiptera: Pseudococcidae) and armored scales (Hemiptera: Diaspididae). Bulletin of Entomological Research 101 | LINK

Park DS, Suh SJ, Oh HW, Hebert PDN (2010) Recovery of the mitochondrial COI barcode region in diverse Hexapoda through tRNA-based primers. BMC Genomics 11 | LINK

Park D-S, Foottit R, Maw E, Hebert PDN (2011) Barcoding Bugs: DNA-Based Identification of the True Bugs (Insecta: Hemiptera: Heteroptera). PLoS ONE 6: e18749 | LINK

Pauls SU, Blahnik RJ, Zhou X, Wardwell CT, Holzenthal RW (2010) DNA barcode data confirm new species and reveal cryptic diversity in Chilean Smicridea (Smicridea) (Trichoptera:Hydropsychidae). Journal of the North American Benthological Society 29: 1058-1074 | LINK

Pereira LHG, Maia GM, Hanner R, Foresti F, Oliveira C (2011) DNA barcodes discriminate freshwater fishes from the Paraiba do Sul River Basin, Sao Paulo, Brazil. Mitochondrial DNA 22 (S1): 71-79 | LINK

Pereira LHG, Pazian MF, Hanner R, Foresti F, Oliveira C (2011) DNA barcoding reveals hidden diversity in the Neotropical freshwater fish Piabina argentea (Characiformes: Characidae) from the Upper Paraná Basin of Brazil. Mitochondrial DNA 22 (S1): 87-96 | LINK

Porco D, Bedos A, Deharveng L (2010) Description and DNA barcoding assessment of the new species Deutonura gibbosa (Collembola: Neanuridae: Neanurinae), a common springtail of Alps and Jura. Zootaxa: 59-68 | LINK

Porco D, Rougerie R, Deharveng L, Hebert PDN (2010) Coupling non-destructive DNA extraction and voucher retrieval for small soft-bodied Arthropods in a high-throughput context: the example of Collembola. Molecular Ecology Resources 10: 960-967 | LINK

Prado BR, Pozo C, Valdez-Moreno M, Hebert PDN (2011) Beyond the Colours: Discovering Hidden Diversity in the Nymphalidae of the Yucatan Peninsula in Mexico through DNA Barcoding. PLoS ONE 6: e27776 EP - | LINK

Puillandre N, Bouchet P, Boisselier-Dubayle M-C, Brisset J, Buge B, Castelin M, Chagnoux S, Christophe T, Corbari L, Lambourdière J, Lozouet P, Marani G, Rivasseau A, Silva N, Terryn Y, Tillier S, J. U, Samadi S (2012) New taxonomy and old collections: integrating DNA barcoding into the collection curation process. Molecular Ecology Resources: no | LINK

Puillandre N, Lambert A, Brouillet S, Achaz G (2011) ABGD, Automatic Barcode Gap Discovery for primary species delimitation. Mol Ecol | LINK

Puillandre N, Macpherson E, Lambourdière J, Cruaud C, Boisselier-Dubayle M-C, Samadi S (2011) Barcoding type specimens helps to identify synonyms and an unnamed new species in Eumunida Smith, 1883 (Decapoda : Eumunididae). Invertebrate Systematics 25: 322-333 | LINK

Puillandre N, Samadi S, Boisselier MC, Cruaud C, Bouchet P (2009) Molecular data provide new insights on the phylogeny of the Conoidea (Neogastropoda). Nautilus 123: 202-210 | LINK

Puillandre N, Strong EE, Bouchet P, Boisselier M-C, Couloux A, Samadi S (2009) Identifying gastropod spawn from DNA barcodes: possible but not yet practicable. Molecular Ecology Resources 9: 1311-1321 | LINK


Q

 

Quicke DLJ, Smith MA, Janzen DH, Hallwachs W, Fernandez-Triana J, Laurenne NM, Zaldívar-Riverón A, Shaw MR, Broad GR, Klopfstein S, Shaw SR, Hrcek J, Hebert PDN, Miller SE, Rodriuez JJ, Whitfield JB, Sharkey MJ, Sharanowski BJ, Jussila R, Gauld ID (dec.), Chesters D, Vogler AP (2012) Utility of the DNA barcoding gene fragment for parasitic wasp phylogeny (Hymenoptera: Ichneumonoidea): data release and new measure of taxonomic congruence. Molecular Ecology Resources. doi: 10.1111/j.1755-0998.2012.03143.x | LINK


R

 

Rasmussen RS, Morrissey MT, Hebert PDN (2009) DNA Barcoding of Commercially Important Salmon and Trout Species (Oncorhynchus and Salmo) from North America. Journal of Agricultural and Food Chemistry 57: 8379-8385 | LINK

Ratnasingham S, Hebert PDN (2011) BOLD's role in barcode data management and analysis: a response. Molecular Ecology Resources 11: 941-942 | LINK

Raupach M, Astrin J, Hannig K, Peters M, Stoeckle M, Waegele J-W (2010) Molecular species identification of Central European ground beetles (Coleoptera: Carabidae) using nuclear rDNA expansion segments and DNA barcodes. Frontiers in Zoology 7: 26 | LINK

Richard B, Decaens T, Rougerie R, James SW, Porco D, Hebert PD (2010) Re-integrating earthworm juveniles into soil biodiversity studies: species identification through DNA barcoding. Mol Ecol Resour 10: 606-614 | LINK

Ritt R, Kratochwill M, Segerer AH, Hausmann A (2011) Nachweis einer neuen Spannerart für Deutschland durch DNA Barcoding: Lomaspilis opis (Butler, 1878) (Insecta: Lepidoptera: Geometridae). Beiträge zur bayerischen Entomofaunistik 11: 25-29 | LINK

Rivera J, Currie DC (2009) Identification of Nearctic black flies using DNA barcodes (Diptera: Simuliidae). Molecular Ecology Resources 9: 224-236 | LINK

Rivera KG, Seifert KA (2011) A taxonomic and phylogenetic revision of the Penicillium sclerotiorum complex. Stud Mycol. 2011 Nov 15;70(1):139-58. | LINK

Robinson EA, Blagoev GA, Hebert PDN, Adamowicz SJ (2009) Prospects for using DNA barcoding to identify spiders in species-rich genera. ZooKeys: 27-46 | LINK

Rougerie R, Decaens T, Deharveng L, Porco D, James SW, Chang CH, Richard B, Potapov M, Suhardjono Y, Hebert PDN (2009) DNA barcodes for soil animal taxonomy. Pesquisa Agropecuaria Brasileira 44: 789-802 | LINK

Rougerie R, Laguerre M (2010) A striking case of sexual dimorphism revealed by the analysis of DNA barcodes in the arctiid moth Senecauxia coraliae de Toulgoët, 1990 from French Guiana (Lepidoptera: Arctiidae). Annales de la Société Entomologique de France in press | LINK

Rougerie R, Smith MA, Fernandez Triana J, Lopez-Vaamonde C, Ratnasingham S, Hebert PDN (2010) Molecular analysis of parasitoid linkages (MAPL): gut contents of adult parasitoid wasps reveal larval host. Molecular Ecology 20: 179-186 | LINK

Rougiere R (2011) Les codes-barres ADN des lépidoptères. Partie 1 : un outil pour l’identification des espèces. Oreina 15 | LINK

Ruangsittichai J, Apiwathnasorn C, Dujardin JP (2011) Interspecific and sexual shape variation in the filariasis vectors Mansonia dives and Ma. bonneae. Infect Genet Evol | LINK


S

 

Saunders GW, Kucera H (2010) An evaluation of rbcL, tufA, UPA, LSU and ITS as DNA barcode markers for the marine green macroalgae. Cryptogamie Algologie 31: 487-528 | LINK

Saunders GW, McDonald B (2010) DNA barcoding reveals multiple overlooked Australian species of the red algal order Rhodymeniales (Florideophyceae), with resurrection of Halopeltis J. Agardh and description of Pseudohalopeltis gen. nov. Botany-Botanique 88: 639-667 | LINK

Schindel D, Stoeckle M, Milensky C, Trizna M, Schmidt B, Gebhard C, Graves G (2011) Project Description: DNA Barcodes of Bird Species in the National Museum of Natural History, Smithsonian Institution, USA. ZooKeys 152: 87-91 | LINK

Segerer AH, Grünewald T, Haslberger A (2011) Entdeckung zweier unerwarteter Schmetterlingsarten in Bayern mit Hilfe von "DNA Barcoding" (Lepidoptera: Eriocraniidae, Tortricidae). Nachrichtenblatt der bayerischen Entomologen 60: 35-38 | LINK

Segerer AH, Haslberger A, Gruenewald T (2011) Occurrence of Olethreutes subtilana (Falkovitsh, 1959) in Central Europe uncovered by DNA barcoding (Tortricidae: Olethreutinae). Nota Lepidopterologica 33 | LINK

Sharkey M, Clutts S, Tucker E, Janzen D, Hallwachs W, Dapkey T, Smith A (2011) Lytopylus Förster (Hymenoptera, Braconidae, Agathidinae) species from Costa Rica, with an emphasis on specimens reared from caterpillars in Area de Conservación Guanacaste. ZooKeys 130: 379-419 | LINK

Shokralla S, Singer GAC, Hajibabaei M (2010) Direct PCR amplification and sequencing of specimens' DNA from preservative alcohol. Biotechniques 48: 233-234 | LINK

Shokralla S, Zhou X, Janzen DH, Hallwachs W, Landry JF, Jacobus LM, Hajibabaei M (2011) Pyrosequencing for Mini-Barcoding of Fresh and Old Museum Specimens. PLoS ONE 6: e21252 | LINK

Skelton PH, Swartz ER (2011) Walking the tightrope: trends in African freshwater systematic ichthyology. Journal of Fish Biology 79: 1413-1435 | LINK

Smith MA, Bertrand C, Crosby K, Eveleigh ES, Fernandez-Triana J, et al. (2012) Wolbachia and DNA Barcoding Insects: Patterns, Potential, and Problems. PLoS ONE 7(5): e36514. doi:10.1371/journal.pone.0036514 | LINK

Smith MA, Eveleigh ES, McCann KS, Merilo MT, McCarthy PC, Van Rooyen KI (2011) Barcoding a Quantified Food Web: Crypsis, Concepts, Ecology and Hypotheses. PLoS ONE 6: e14424 | LINK

Smith PJ, Steinke D, Dettai A, McMillan P, Welsford D, Stewart A, Ward RD (2012) DNA barcodes and species identifications in Ross Sea and Southern Ocean fishes. Polar Biology 2012, DOI: 10.1007/s00300-012-1173-8 | LINK

Smith PJ, Steinke D, McMillan PJ, Stewart AL, McVeagh SM, Diaz de Astarloa JM, Welsford D, Ward RD (2011) DNA barcoding highlights a cryptic species of grenadier Macrourus in the Southern Ocean. Journal of Fish Biology 78: 355-365 | LINK

Smith PJ, Steinke D, McMillan PJ, Stewart AL, Ward RD (2011) DNA barcoding of morid cods reveals deep divergence in the antitropical Halargyreus johnsoni but little distinction between Antimora rostrata and Antimora microlepis. Mitochondrial DNA 22 (S1): 21-26 | LINK

Sourakov A, Zakharov EV (2011) “Darwin’s butterflies”? DNA barcoding and the radiation of the endemic Caribbean butterfly genus Calisto (Lepidoptera, Nymphalidae, Satyrinae). Comparative Cytogenetics 5: 191-210 | LINK

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Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139 | LINK

Sriwattanarothai N, Steinke D, Ruenwongsa P, Hanner R, Panijpan B (2010) Molecular and morphological evidence supports the species status of the Mahachai fighter (Betta sp. Mahachai) and reveals new species of Betta from Thailand. Journal of Fish Biology 77: 414-424 | LINK

Steinke D, Hanner R (2011) The FISH-BOL Collaborators Protocol. Mitochondrial DNA 22 (S1): 10-14 | LINK

Strutzenberger P, Brehm G, Fiedler K (2010) DNA barcoding-based species delimitation increases species count of Eois (Geometridae) moths in a well-studied tropical mountain forest by up to 50%. Insect Science 18: 349-362 | LINK

Stur E, Ekrem T (2011) Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding. Zootaxa 2743: 27-39 | LINK

Stur E, Spies M (2011) Description of Chaetocladius longivirgatus sp. n., with a review of C. suecicus (Kieffer) (Diptera: Chironomidae). Zootaxa 2762: 37-48 | LINK


T

 

Tänzler R, Sagata K, Surbakti S, Balke M, Riedel A (2012) DNA Barcoding for Community Ecology - How to Tackle a Hyperdiverse, Mostly Undescribed Melanesian Fauna. PLoS ONE 7: e28832 | LINK

Tavares ES, Goncalves P, Miyaki CY, Baker AJ (2011) DNA Barcode Detects High Genetic Structure within Neotropical Bird Species. PLoS ONE 6: e28543 | LINK


V

 

Valdez-Moreno M, Ivanova NV, Elias-Gutierrez M, Contreras-Balderas S, Hebert PDN (2009) Probing diversity in freshwater fishes from Mexico and Guatemala with DNA barcodes. Journal of Fish Biology 74: 377-402 | LINK

Valdez-Moreno M, Vásquez-Yeomans L, Elias-Gutierrez M, Ivanova NV, Hebert PDN (2010) Using DNA barcodes to connect adults and early life stages of marine fishes from the Yucatan Peninsula, Mexico: potential in fisheries management. Marine and Freshwater Research 61: 655–671 | LINK

Vernooy R, Haribabu E, Muller MR, Vogel JH, Hebert PDN, Schindel DE, Shimura J, Singer GAC (2010) Barcoding Life to Conserve Biological Diversity: Beyond the Taxonomic Imperative. PLoS Biol 8: e1000417 | LINK

Victor B (2010) Emblemariopsis carib and Emblemariopsis arawak, two new chaenopsid blennies from the Caribbean Sea: DNA barcoding identifies males, females, and juveniles and distinguishes sympatric cryptic species. Journal of the Ocean Science Foundation 4: 1-29 | LINK

Victor B, Vásquez-Yeomans L, Valdez-Moreno M, Wilk L, Jones DL, Lara MR, Caldow C, Shivji M (2010) The larval, juvenile, and adult stages of the Caribbean goby, Coryphopterus kuna (Teleostei: Gobiidae): a reef fish with a pelagic larval duration longer than the post-settlement lifespan. Zootaxa 2346: 53-61 | LINK

Victor BC (2010) The Redcheek Paradox: the mismatch between genetic and phenotypic divergence among deeply divided mtDNA lineages in a coral-reef goby, with the description of two new cryptic species from the Caribbean Sea. Journal of the Ocean Science Foundation 3: 2-16 | LINK

Victor BC, Hanner R, Shivji M, Hyde J, Caldow C (2009) Identification of the larval and juvenile stages of the Cubera Snapper, Lutjanus cyanopterus, using DNA barcoding. Zootaxa: 24-36 | LINK

Victor BC, Randall JE (2010) Gramma dejongi sp. nov., a New Basslet (Perciformes: Grammatidae) from Cuba, a Sympatric Sibling Species of G. loreto. Zoological Studies 49: 865-871 | LINK


W

 

Ward RD, Hanner R, Hebert PDN (2009) The campaign to DNA barcode all fishes, FISH-BOL. Journal of Fish Biology 74: 329-356 | LINK

Webb JM, Jacobus LM, Funk DH, Zhou X, Kondratieff B, et al. (2012) A DNA Barcode Library for North American Ephemeroptera: Progress and Prospects. PLoS ONE 7(5): e38063. doi:10.1371/journal.pone.0038063 | LINK

Weigand AM, Götze M-C, Jochum A (2012) Outdated but established?! Conchologically driven species delineations in microgastropods (Carychiidae, Carychium). Organisms Diversity & Evolution | LINK

Weigand AM, Jochum A, Pfenninger M, Steinke D, Klussmann-Kolb A (2011) A new approach to an old conundrum - DNA barcoding sheds new light on phenotypic plasticity and morphological stasis in microsnails (Gastropoda, Pulmonata, Carychiidae). Molecular Ecology Resources 11: 255-265 | LINK

White WT, Last PR (2012) A review of the taxonomy of chondrichthyan fishes: a modern perspective. Journal of Fish Biology: no | LINK

Wilson JJ (2010) Assessing the Value of DNA Barcodes and Other Priority Gene Regions for Molecular Phylogenetics of Lepidoptera. PLoS ONE 5: e10525 | LINK

Wilson JJ (2011) DNA barcoding and Lepidoptera taxonomy. Doctoral Thesis. Integrative Biology, Guelph | LINK

Wilson JJ, Landry JF, Janzen DH, Hallwachs W, Nazari V, Hajibabaei M, Hebert PDN (2011) Identity of the ailanthus webworm moth (Lepidoptera,Yponomeutidae), a complex of two species: evidence from DNA barcoding, morphology and ecology. ZooKeys: 41-60 | LINK

Wilson JJ, Rougerie R, Schonfeld J, Janzen DH, Hallwachs W, Hajibabaei M, Kitching IJ, Haxaire J, Hebert PDN (2011) When species matches are unavailable are DNA barcodes correctly assigned to higher taxa? An assessment using sphingid moths. BMC Ecology 11: 18 | LINK


Z

 

Zhang J (2011) Species identification of marine fishes in China with DNA barcoding. Evid Based Complement Alternat Med: 78253-78253 | LINK

Zhang JB, Hanner R (2011) DNA barcoding is a useful tool for the identification of marine fishes from Japan. Biochemical Systematics and Ecology 39: 31-42 | LINK

Zhou X, Jacobus L, DeWalt R, Adamowicz S, Hebert P (2010) Ephemeroptera, Plecoptera, and Trichoptera fauna of Churchill (Manitoba, Canada): insights into biodiversity patterns from DNA barcoding. Journal of the North American Benthological Society 29: 814-837 | LINK

Zhou X, Robinson JL, Geraci CJ, Parker CR, Flint OS, Etnier DA, Ruiter D, DeWalt RE, Jacobus LM, Hebert PDN (2011) Accelerated construction of a regional DNA-barcode reference library: caddisflies (Trichoptera) in the Great Smoky Mountains National Park. Journal of the North American Benthological Society 30: 131-162 | LINK

 

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